Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., exonuclease SbcD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  103 bits (257), Expect = 9e-27
 Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           +K LH++DWHLG++  + + L +Q  VL ++I+      VD V++AGDI+D   P   A+
Sbjct: 2   LKLLHSADWHLGKRLQEYARLPEQQLVLEEMIEVADREDVDLVLLAGDIFDSFNPSHEAV 61

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120
           +LL + +  +  + K P++ I GNHD  + +       +  G+  ++ +EQ++ P  + S
Sbjct: 62  ELLYKTLRKLSKDGKRPVVAISGNHDSTQFISAPDPLARELGILFYSSYEQVLAPGKVDS 121

Query: 121 PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILAQ--RNPSQRHVL----- 173
               E+      + + +L +H +   I     A++ L ++ L +  +  + R VL     
Sbjct: 122 --GLEITQSSPGFVELKLPQHPFPVRIILAPYANEVLLKTYLGEEDKEAALREVLGKKWQ 179

Query: 174 -ISHCFVDGA-------------------MESESERPLSIGGSDRVDHRHFLP--FDYVA 211
            I+  + D A                    E ESERP+   G  +  + H +P    Y A
Sbjct: 180 NIADNYCDDAGVNLFMGHFFFMKEGEKPEAEPESERPILHVGGTQALYTHLIPDSIQYAA 239

Query: 212 LGHLHQPQM--KGAEHIRYSGSLMKYSFGEQHQNKGATLVE 250
           LGHLH+     K    + YS S + YSF E +Q K   LV+
Sbjct: 240 LGHLHRYHSVDKQPCPVVYSSSPLAYSFSEANQEKKVVLVK 280