Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Nuclease SbcCD subunit D from Alteromonas macleodii MIT1002

 Score =  124 bits (310), Expect = 8e-33
 Identities = 87/311 (27%), Positives = 153/311 (49%), Gaps = 29/311 (9%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           MK LHTSDWHLG+ F   S  ++ +A L  L+  +  + +DA+IVAGD++D   PP+ A 
Sbjct: 16  MKILHTSDWHLGQSFFTKSRKNEHAAFLKWLLQQVEVHQIDAIIVAGDVFDTGTPPSYAR 75

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFAD-FEQMMQPLVLH 119
           +L    +  + G ++  L+++ GNHD    L  +   +K    H+ A  + ++ + ++  
Sbjct: 76  ELYHAFIGELQG-MQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGELSEQVITL 134

Query: 120 SPQAGE--VAFWGMPYHDPE---------------------LVRHY--YHNDITTHDAAH 154
           + + G+       +P+  P                      + +HY   +N+  +  A+ 
Sbjct: 135 NDRKGQPSAVLCAVPFIRPRDVLVSEAGQSGTDKRQALGDAIKQHYGTLYNEALSLRASM 194

Query: 155 QFLCESILAQRNPSQRHVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGH 214
           +       ++ + +   +   H    G  +SES R + IG  +  D + F P DY+ALGH
Sbjct: 195 EEKRIKDGSENSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYIALGH 254

Query: 215 LHQPQ-MKGAEHIRYSGSLMKYSFGEQHQNKGATLVELGQQGFI-SATHIPLIAPHQMRI 272
           +H+PQ +   EHIRYSGS +  SF E +  K   L+    +    + + +P+     M +
Sbjct: 255 IHRPQKVAKTEHIRYSGSPIPLSFDELNTQKQVVLITFESESTTPTISTLPVPRFQAMEV 314

Query: 273 IEGELEAILAA 283
           I+G+L+AI AA
Sbjct: 315 IKGDLKAIEAA 325