Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Nuclease SbcCD subunit D from Acinetobacter radioresistens SK82

 Score =  121 bits (304), Expect = 3e-32
 Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 42/355 (11%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAA- 59
           ++F HTSDWHLG+ F+  S   +    L  LI+ ++D    A+++AGD++D   P ++A 
Sbjct: 12  VRFFHTSDWHLGQFFYNHSRQYEHQQFLTWLIEQIKDKQPHALLIAGDVFDVINPASSAQ 71

Query: 60  IDLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFA----------DF 109
             L   +            LMI GNHD   RL      ++                  DF
Sbjct: 72  KQLYQFLADAHSAAPHMQTLMIAGNHDSGYRLEQVEPLLEKYNAKTVGIVRWNTEHRLDF 131

Query: 110 EQMMQPLVLHSPQAGEVAFW--GMPYHDPELVRHYYHNDITTH-----DAAHQFLCESIL 162
           ++++ P  +H+ +  E+  W   +P+  P  +    H + T       +  HQ L +  L
Sbjct: 132 DRLILP--IHN-EYQEIVAWCIALPFLRPAEITG--HGEATQDSQQAIEYIHQALIKEAL 186

Query: 163 AQRNPSQRHVLISHCFVDGAMES-ESERPLSIGGSDRVDHRHFLP-FDYVALGHLHQPQM 220
            ++   Q  +L+SH  + GA ES ESERP+ IG  + +    F P  DYVALGHLH+PQ 
Sbjct: 187 QRKTADQALILMSHAHMQGADESKESERPIIIGNHEALSTELFSPEIDYVALGHLHKPQK 246

Query: 221 KGAEHIRYSGSLMKYSFGEQHQNKGATLVELGQQGFISATHI---PLIAPH--QMRIIEG 275
             + H+RYSGS +  SF E   N    ++E+     +S   +   PL  P   Q+  + G
Sbjct: 247 VQSPHVRYSGSPIPLSFSE--LNYKHQVLEVNIDPDLSENRLEMNPLYIPRTVQLHRLSG 304

Query: 276 ELEAIL-------AAGATDPQADDYLLVRLLDKHAILDPMEKLRQVYPNVLHLEK 323
           EL+ +L       A   +D    DYL +   + +++  P   LR+   ++L  E+
Sbjct: 305 ELDEVLTQLTLLPAGEISDIDQRDYLDI---EYYSLTPPPPDLRKKIEDLLPPER 356