Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 7e-26
 Identities = 76/309 (24%), Positives = 147/309 (47%), Gaps = 5/309 (1%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A LAG+S TT S+V+N   +   +SE  + KV A ++Q ++ P   A +L+A  +
Sbjct: 3   TIKDVAALAGISYTTVSHVVN---KTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTT 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL++P+  N  +A LA+ +E    + GY +++  SDD+ + +      L+ +RID L
Sbjct: 60  ATIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGL 119

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVHS 181
            V S     S     L    TP++ +DRALD      V  +    A+  TR +L      
Sbjct: 120 IVTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRD 179

Query: 182 VGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFN-REEGRKVFAKWVANDQLPD 240
           +  +G      V++ R  G+  A+++ G+       +  +    G    A  +  +  P 
Sbjct: 180 IACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTENPPS 239

Query: 241 AVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           A+ A++  +  G+L    E+   +  ++ +  F D ++  ++   + ++ Q    + ++A
Sbjct: 240 AIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGETA 299

Query: 300 LALALNASA 308
             L L   A
Sbjct: 300 AELLLRRIA 308