Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 74/327 (22%), Positives = 152/327 (46%), Gaps = 12/327 (3%)

Query: 1   MTLDEIAKLAGVSKTTASYV-INGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAG 59
           +T  ++AKLAGVS++T S V + G +    +SEKT+ KV    +  N+RP+  A +L   
Sbjct: 15  VTSKDVAKLAGVSQSTVSRVFVPGSS----VSEKTKQKVFEAAKVLNYRPNAFARSLTTN 70

Query: 60  NSRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRID 119
            S+  GL+ PD +   + +  +L+    +Q GY  ++     D Q +  +   +   R+D
Sbjct: 71  ESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQ-DNHSIPNIFQYRVD 129

Query: 120 ALFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDV 179
            +  AS   + +  Y + ++   P++   R ++    S VIS+++ A  +  + +     
Sbjct: 130 GVIAASATFNKT-LYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGA 188

Query: 180 HS-VGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQL 238
            S V L G +P    + ER+QGF    K     T       ++         + +A+   
Sbjct: 189 QSAVYLTGEVPTF-TNDERQQGFCSEFKSLTGFTPPVVKATYDYTGSLDTIRRLIADSSR 247

Query: 239 PDAVVATSYTLLEGILDVLLEQPELM--QKVRLATFGDNRLLDFLPIRVNSLPQQFELIA 296
           P A+   +  L   ++D+   +  L     +++  F +    ++L  ++ +  Q F+ +A
Sbjct: 248 PAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLA 307

Query: 297 DSALALALNASAKRYQTGIEL-IPRQL 322
             ++ + ++    R Q+ ++L +P +L
Sbjct: 308 RESVKIIVDQITTRNQSLVKLMVPTKL 334