Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 30/337 (8%)

Query: 3   LDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNSR 62
           + ++A++A VS  T S V++G+A    +    + +V+A V    +RP+ AA  LR+ +S 
Sbjct: 5   IKDVARVAEVSPATVSRVLSGRA----VDPAMRDRVLAAVRTTGYRPNLAARRLRSRHSN 60

Query: 63  SFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDALF 122
           + GLI+ D+ N  +  +++ +E  + + G ++++  +D+DP  E    + +   R+  + 
Sbjct: 61  TIGLIVADIRNPFFTAVSRTVEDIAYERGLRVILCNTDEDPAKEAMYLQLMQEERVTGVI 120

Query: 123 VA---SGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDV 179
           +A    G   AS+      ++  P+I IDR        CV+ ++   A  L   +  Q  
Sbjct: 121 LAPTRQGAKKASQ-----TKAEHPIILIDRVAATT-TDCVVLDNDAMARTLVAHLHAQGF 174

Query: 180 HSV-GLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQL 238
            S+ GL GA        ER  GF  A +  G+PT      H   E  R V A     D+ 
Sbjct: 175 RSITGLFGAAS--TTGAERRAGFEQAAQMIGIPTRSLSVPHGEGEAERLVSALLQTPDR- 231

Query: 239 PDAVVATSYTLLEGILDVL----LEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFEL 294
           P+A++A++  +L  +L       L  P       LA F ++   +F    ++ + Q  E 
Sbjct: 232 PEAIIASNGLMLMSVLRAAHALGLSVP---GDFALAGFDNDTWTEFAADGLSVIEQPVEE 288

Query: 295 IADSALALAL------NASAKRYQTGIELIPRQLKVR 325
           I  +A+A+ L      NA+A++      LI R   +R
Sbjct: 289 IGRTAMAMLLDRLDHPNAAARKVVLSGRLIIRGSTIR 325