Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Catabolite repressor/activator from Pseudomonas sp. DMC3

 Score =  281 bits (720), Expect = 1e-80
 Identities = 156/327 (47%), Positives = 215/327 (65%), Gaps = 2/327 (0%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           + L +IA+LAGVS TTASYVINGKA++ RIS  T  +V AVV+ + F P+  A+ LR+ +
Sbjct: 1   LKLSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVDLHGFTPNPQAAGLRSRH 60

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           +R+ G I+PDLEN SYAR+AKLLEQ +R  GYQ+LIA SDD P  E    +   +RR DA
Sbjct: 61  TRTLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDAPDSERQLLQLFRARRCDA 120

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L VAS +P+  + Y +LQ  G P+IAIDR ++ E+F  VIS+D  A+  LT+S+L     
Sbjct: 121 LIVASCLPAGDDSYRQLQAKGLPIIAIDRVMEPEHFCSVISDDREASLHLTQSLLDPQPK 180

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVAN-DQLP 239
            + L+GA PEL++S+ER  GF  A+        + + E F+RE G+++  + +     LP
Sbjct: 181 QIVLLGARPELSISQERAAGFRAALNDFKGEVLVEHAESFSRECGKQLMEELLQRLGHLP 240

Query: 240 DAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           DA+V TSY LL+G+ D L + P   + +RL TFGD +LLDFLP+ VN++ QQ +LIAD A
Sbjct: 241 DALVTTSYVLLQGVFDALHDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMSQQHQLIADKA 300

Query: 300 LALALNA-SAKRYQTGIELIPRQLKVR 325
           L LAL A     YQ G++ I R  K R
Sbjct: 301 LELALAAVEQDDYQPGVQAIARTFKQR 327