Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family DNA-binding transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  102 bits (254), Expect = 1e-26
 Identities = 78/310 (25%), Positives = 150/310 (48%), Gaps = 7/310 (2%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A LAG+S TT S+V+N   +   +SE  + KV A ++Q ++ P   A +L+A  +
Sbjct: 3   TIKDVAALAGISYTTVSHVVN---KTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTT 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL++P+  N  +A LA+ +E    + GY +++  SDD+ + + +    L+ +RID L
Sbjct: 60  ATIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRSYLRVLLEKRIDGL 119

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVHS 181
            V S     S     L    TP++ +DRALD      V  +    A+  TR +L      
Sbjct: 120 IVTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRD 179

Query: 182 VGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEH--FNREEGRKVFAKWVANDQLP 239
           +  +G      V++ R  G+  A+++ G+       +   F    G     + +AN+  P
Sbjct: 180 IACIGGPAHTRVAQMRLAGYHRALQEAGVAVAANRTQESDFTSTGGYTAAVQLLANNP-P 238

Query: 240 DAVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADS 298
            A+ A++  +  G+L    E+   +  ++ +  F D ++  ++   + ++ Q    + ++
Sbjct: 239 SAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGET 298

Query: 299 ALALALNASA 308
           A  L L   A
Sbjct: 299 AAELLLRRIA 308