Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  104 bits (259), Expect = 3e-27
 Identities = 82/314 (26%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +T  ++A++AG S    SYVIN   +   ++E T+ +V+  +E+  +RP+  A AL +GN
Sbjct: 9   ITRADVARVAGTSVAVVSYVINNGPRP--VAEATRLRVLEAIEKTGYRPNDIARALASGN 66

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           + ++GL++PD+ N  +A LA+ L++ +   G  +L+  + DD Q E      L+ R++D 
Sbjct: 67  TLTYGLVVPDISNPFFATLAQALQREAFSHGRVLLLGDAGDDRQREHDLINHLLRRQVDG 126

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVIS-EDFGAAFELTRSVLTQDV 179
           L   S       ++  ++ SGTP + ID  +D     C I  ++  AA + TR +L    
Sbjct: 127 LLYTS--VDRHPWFDLIRASGTPCVMID-TIDSHAGVCAIRVDERDAACQATRHLLQHGY 183

Query: 180 HSVGL-VGALPELNVSREREQGFAMAVKQRGLPTTLG--YGEHFNREEGRKVFAKWVAND 236
             +G+ VG L  LN +++R  G+  A+K+ G+       +   + R+ G +   K +   
Sbjct: 184 QDIGIFVGPLTMLN-AQDRLNGWRDALKEAGIAPREEWIFEAPYTRQGGYQASQKMLQAP 242

Query: 237 QLPDAVVATSYTLLEGILDVLLE-QPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELI 295
           + P A+  ++     G L  L E +  +   + +  F   +  +F    ++++ Q  + +
Sbjct: 243 R-PRAIFTSNEQQALGCLSALAEHRLRVPDDLAIICFNGTQQSEFSVPPLSAVEQPIDAM 301

Query: 296 ADSALALALNASAK 309
           A  A+A+    +A+
Sbjct: 302 AKRAIAMLAAGAAQ 315