Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Fructose repressor FruR, LacI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  267 bits (683), Expect = 2e-76
 Identities = 143/323 (44%), Positives = 206/323 (63%), Gaps = 3/323 (0%)

Query: 3   LDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNSR 62
           LDEIA+LAGVS+TTASYVINGKA++YR+S+KT  KVMAVV ++N+ P+  A+ LRAG +R
Sbjct: 3   LDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTR 62

Query: 63  SFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDALF 122
           S GL+IPDLENTSY R+A  LE+ +RQ GYQ+LIACS+D P  EM   E L+ R++DA+ 
Sbjct: 63  SIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAII 122

Query: 123 VASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVHSV 182
           V++ +P    +Y +      P++A+DRALD E+F+ V+  D   A  L   +      +V
Sbjct: 123 VSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAETV 182

Query: 183 GLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQLPDAV 242
             +GALPEL+VS  REQGF  A K         Y   + RE   ++F KW+    +P A+
Sbjct: 183 LYLGALPELSVSFLREQGFRTAWKDDPREVNFLYANSYEREAAAQLFEKWLETHPMPQAL 242

Query: 243 VATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSALA 301
             TS+ LL+G++DV L +  +L   + +ATFGD+ LLDFL   V ++ Q+   +A+  L 
Sbjct: 243 FTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDHELLDFLQCPVLAVAQRHRDVAERVLE 302

Query: 302 LALNA--SAKRYQTGIELIPRQL 322
           + L +    ++ + G+  I R L
Sbjct: 303 IVLASLDEPRKPKPGLTRIRRNL 325