Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  270 bits (691), Expect = 3e-77
 Identities = 145/325 (44%), Positives = 207/325 (63%), Gaps = 3/325 (0%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           M LDEIA+LAGVS+TTASYVINGKA++YR+S+KT  KVMAVV ++N+ P+  A+ LRAG 
Sbjct: 1   MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR 60

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           +RS GL+IPDLENTSY R+A  LE+ +RQ GYQ+LIACS+D P  EM   E L+ R++DA
Sbjct: 61  TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA 120

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           + V++ +P    +Y +      P++A+DRALD E+F+ V+  D   A  L   +      
Sbjct: 121 IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE 180

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQLPD 240
           +V  +GALPEL+VS  REQGF  A K         Y   + RE   ++F KW+    +P 
Sbjct: 181 TVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQ 240

Query: 241 AVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           A+  TS+ LL+G++DV L +  +L   + +ATFGDN LLDFL   V ++ Q+   +A+  
Sbjct: 241 ALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV 300

Query: 300 LALALNA--SAKRYQTGIELIPRQL 322
           L + L +    ++ + G+  I R L
Sbjct: 301 LEIVLASLDEPRKPKPGLTRIKRNL 325