Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., HTH-type transcriptional regulator GalR from Erwinia tracheiphila SCR3

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 80/308 (25%), Positives = 146/308 (47%), Gaps = 11/308 (3%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A+LAGVS  T S VIN      ++S+ ++  V   +E+  + P+  A AL   ++
Sbjct: 3   TIKDVARLAGVSVATVSRVINHSP---KVSDISRQAVQTAMEELQYHPNANARALAQQST 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL++ D+ +  +  L K +EQ + + G+ +LI       Q E  A E L+  R DAL
Sbjct: 60  ETMGLVVGDVSDPFFGALVKAVEQVAYETGHFLLIGNGYHTEQKEHQAIEQLIRHRCDAL 119

Query: 122 FV-ASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
            V A  IP   E  L L      ++ I+R+L      CV  +D   A+  TR ++ Q   
Sbjct: 120 VVHAKKIP--DEQLLSLMAQIPGMVLINRSLPGYEQRCVALDDHYGAWLATRHLIQQGHQ 177

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTT---LGYGEHFNREEGRKVFAKWVANDQ 237
           ++  + +   ++ + ER QG+  A+ +   P     + YGE  +   G +   + +   +
Sbjct: 178 NIAFICSNHPISDAEERLQGYYHALCEHQQPCNDRLVAYGEP-DEVGGEQAMTELLGRGK 236

Query: 238 LPDAVVATSYTLLEGILDVLLEQ-PELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIA 296
              AV   + ++  G L VL +    + +++ L  F D  +  ++  R+ ++      +A
Sbjct: 237 PFSAVACYNDSMAAGALAVLNDNGVRVPEEMSLIGFDDVLVSRYVRPRLTTVRYPIVTMA 296

Query: 297 DSALALAL 304
             A  LAL
Sbjct: 297 QQAALLAL 304