Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., LacI family DNA-binding transcriptional regulator from Erwinia tracheiphila SCR3

 Score =  158 bits (399), Expect = 2e-43
 Identities = 93/306 (30%), Positives = 172/306 (56%), Gaps = 7/306 (2%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +T+ +IA LAGVSKTTAS V+NG+ ++ R++++T+ +VMA+  Q +++P   A  LR   
Sbjct: 7   VTISDIAALAGVSKTTASLVLNGRGKELRVAKETRERVMAIARQNHYQPSIHARLLRDER 66

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           S + GL++P++ N  +A  +  LE   R+AG Q+LI+C+D++   EM     LV+R++D 
Sbjct: 67  SHTLGLVVPEITNYGFAVFSHELETLCREAGLQLLISCTDENAGQEMVVVNNLVARQVDG 126

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L +AS I + S+ Y+KL +   PV+  DR ++D     V+++      +L   +      
Sbjct: 127 LIIASSILNDSD-YVKLSEQ-LPVVLFDRYMNDTQLPLVVTDAIPPTADLVERLAHAHPD 184

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGL---PTTLGYGEHFNREEGRKVFAKWVAN-D 236
            +  +G  P L+ +R+R  GF   + + G+   P  + +G  ++   G ++FA   A   
Sbjct: 185 EIYFLGGQPRLSPTRDRLAGFIQGLARAGITPHPDWIIHGS-YHPSSGYEMFAGLCARLG 243

Query: 237 QLPDAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIA 296
           + P A+   +  LLEG+L  + +   L  ++ +A+F D+ L D L + ++++ Q    +A
Sbjct: 244 RPPKALFTAACGLLEGVLRYMSQHHLLTSEMHIASFDDHYLYDSLSLNIDTVEQNVPRLA 303

Query: 297 DSALAL 302
               ++
Sbjct: 304 QECFSI 309