Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Transcriptional regulators from Enterobacter asburiae PDN3

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 11/314 (3%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A+LAGVS  T S VIN      + S+ ++  V   +E  N+ P+  A AL   ++
Sbjct: 3   TIKDVARLAGVSVATVSRVINDSP---KASDASRQAVQTAMESLNYHPNANARALAQQST 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL++ D+ +  +  + K +EQ S Q G  +LI     + Q E  A E L+  R  AL
Sbjct: 60  ETIGLVVGDVSDPFFGAMVKAVEQVSYQTGNFLLIGNGYHNEQKERQAIEQLIRHRCAAL 119

Query: 122 FV-ASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
            V A  IP A   +L  Q  G  ++ I+R +      CV  +D   A+  TR ++ Q   
Sbjct: 120 VVHAKMIPDAELIHLMKQMPG--MVIINRIIPGFEKRCVALDDRYGAWLATRHLIQQGHT 177

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTT---LGYGEHFNREEGRKVFAKWVANDQ 237
            +G + +   ++ + +R QG+  A+++ GLP     + YGE  +   G +   + +   +
Sbjct: 178 RIGYLCSNHPISDAEDRLQGYYDALRENGLPCNDRLVAYGEP-DESGGEQAMTELLGRGR 236

Query: 238 LPDAVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIA 296
              AV + + ++  G + VL +   E+  ++ L  F D  +  ++  R+ ++      +A
Sbjct: 237 NFTAVASYNDSMAAGAMGVLNDNGIEVPAEISLIGFDDVLVSRYVRPRLTTVRYPIITMA 296

Query: 297 DSALALALNASAKR 310
             A  LAL  + +R
Sbjct: 297 TQAAELALALAEQR 310