Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., LacI family DNA-binding transcriptional regulator from Dickeya dadantii 3937

 Score =  164 bits (415), Expect = 3e-45
 Identities = 100/322 (31%), Positives = 177/322 (54%), Gaps = 8/322 (2%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+++IA    +S TT   V+NGKA++YRIS KTQ ++   V +Y +  +H A +L+   +
Sbjct: 4   TVEQIASALKLSVTTVRLVLNGKAEQYRISAKTQQRIHQYVTEYGYTVNHVARSLKLNKT 63

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GLI+P L N  ++ LA+ LE   R+ GYQ++I+CS  DPQ E    EAL+ R +D L
Sbjct: 64  ETLGLIVPRLSNLFFSTLAEKLETRCREVGYQLMISCSYSDPQYENRLVEALLQRNVDGL 123

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVL-TQDVH 180
           FV      A++++ K+ +   P++ +DR    +    V+S++      LT ++L  Q   
Sbjct: 124 FVVPSSLQAAQHHAKVVKK--PLVLLDRDFGIDQLPLVMSDNLQGGAALTEAMLAAQPAA 181

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWV-ANDQLP 239
            +  +    + +  R+R +G+  +V+Q GL   +    H  RE+G  +  +++  +D  P
Sbjct: 182 PLFFMAGDVQQSAIRDRLRGYRQSVQQAGLTPAVLEASHNRREDGMLMMEQFLRQHDAPP 241

Query: 240 DAVVATSYTLLEGILDVLLEQ-PELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADS 298
            A +A+S  +LEG+L V+ E+   +   + + TF ++ +L FLP  + S+ Q  +   + 
Sbjct: 242 PAFIASSLPVLEGMLSVVRERYGYIPAHINIGTFDEHAMLGFLPNTLWSMRQNEDAWTEQ 301

Query: 299 ALAL---ALNASAKRYQTGIEL 317
           A A    ALN  A+ ++  I +
Sbjct: 302 AFAAMQQALNGEAQPHKAVIPM 323