Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Catabolite control protein A from Azospirillum sp. SherDot2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 8/266 (3%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A  AGVS  T S V+NG       + +T  KV A     +FRP      L+A  +
Sbjct: 6   TIRDVAARAGVSIATVSRVLNGSGNA---TPETMEKVRAAASDLSFRPSTIGRNLKAART 62

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
           R+ G+++P L N  +A     ++  + +AGY +LIA +D DP  E+ A E L+S R++ L
Sbjct: 63  RTVGVLVPSLTNPVFAESVAGIQDAAAEAGYSVLIASTDYDPGREVRAIEGLLSNRVEGL 122

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVHS 181
            +       S     L +   P +      +    + V  ++  AA  +   +       
Sbjct: 123 VLTVADADRSGSLDTLDEVRLPYVLAYNQPERVPRAHVSVDNVAAARAVVERMAALGHRR 182

Query: 182 VGLV-GALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVANDQLPD 240
           +G++ G   + + SR R  G+  A+   GLP        FN        A ++   + P 
Sbjct: 183 IGMIAGRFRQSDRSRRRHAGWLAALDDAGLPPGPVVEVDFNELRLAHRLAPFLEGPERPT 242

Query: 241 AVVATSYTL----LEGILDVLLEQPE 262
           A  A++  L    +  + D+ L  P+
Sbjct: 243 AFFASNDMLALATIRALRDLGLSVPD 268