Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 78/332 (23%), Positives = 154/332 (46%), Gaps = 12/332 (3%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +T+  +A  AGVSK+T S +++ +    R   +T  +V  +  +  +  D +A+ LR G+
Sbjct: 12  VTVHSVAAAAGVSKSTVSRILDERLP--RSDSETAQRVREIAAELGYVRDVSAANLRRGS 69

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           + + G+I+P L +T  A L + + +   ++G   ++A ++D PQ +  AAE+L++R +D 
Sbjct: 70  TMTIGVIVPRLTDTVMAMLYEAIAKACTRSGRFAIVATTEDKPQADRLAAESLLNRGVDG 129

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L + S      ++  +L++ G P +   R   D +    + +D    +  TR +L     
Sbjct: 130 L-ILSTARGDDDFPDELRERGVPYVLALRT--DGHSLSAVGDDRLGGYLATRHLLDLGHE 186

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPT--TLGYGEHFNREEGRKVFAKWVANDQL 238
            +G++      + +  R  G+  A+++  +     L     F  + G +   K +     
Sbjct: 187 RIGVIAGPDYASSATGRVDGYRHALEEASISVDPQLIVPSTFGIQSGAEAIEKLMGLGCR 246

Query: 239 PDAVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIAD 297
           P A+ A +     G L  L +    +   V L  + D  ++  LP  + +L   F+ IA 
Sbjct: 247 PTAIFAVNDNTAIGALSALSKMGISVPDDVSLVGYNDIPIVSHLPTPLTTLRVPFDQIAA 306

Query: 298 SALALALNASAKR----YQTGIELIPRQLKVR 325
           +A+ L  + +A R      +   LIPR+   R
Sbjct: 307 NAIDLLTHTTALRDNRILVSAPTLIPRKSTAR 338