Pairwise Alignments

Query, 400 a.a., bifunctional PTS fructose transporter subunit IIA/HPr protein from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., fused fructose-specific PTS enzymes: IIA component/HPr component (NCBI) from Escherichia coli BW25113

 Score =  313 bits (802), Expect = 5e-90
 Identities = 173/401 (43%), Positives = 244/401 (60%), Gaps = 27/401 (6%)

Query: 1   MLELTTQDIQLQQHFANKQAAIQGLAHALTAKGLVAEGYAQGMLNREAQHSTYLGNGIAI 60
           M +L+ QDI   +   +K+ AI+ +A AL   G VAEGY  GML RE Q ST+LGNGIAI
Sbjct: 1   MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAI 60

Query: 61  PHGTTDTRELVKQTGVTAMHFPQGLDWGDGNLVYVAIGIAAKSDEHLGILKQLTRVLSAD 120
           PHGTTDTR+ V +TGV    FP+G+ WGDG + YVAIGIAA SDEHLG+L+QLT VLS D
Sbjct: 61  PHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDD 120

Query: 121 GVEQALQQAKTAQQIIAIIKGEAQL-TADFDASLIQLQFPASDMVQMSAVAGGLLKNTGC 179
            V + L+ A TA+++ A++ GE Q      D  ++ L   ASD++ + A+    LK  G 
Sbjct: 121 SVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGA 180

Query: 180 AENEFVADLVTKAPTHLGRGLWLVASDRAVKRTGMSIVTTANHCEYEQQAVKALIAFSVC 239
            +  FV   + + P +LG+G+WL  S     R+ +++   AN  + + +    L++ ++ 
Sbjct: 181 VDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMN 240

Query: 240 NDVHQPLLNTITQCVFEQKQDQLLQADVQQLLNLFSGNAEQTIAQRTIAVGTITEETIAA 299
           +D    +L  +   + + K D+LL+AD   LL L + +               T++ ++A
Sbjct: 241 DDQPIAVLKRLADLLLDNKADRLLKADAATLLALLTSD------------DAPTDDVLSA 288

Query: 300 ETVAEPDSARAHTATFRIKNSHGLHARPGAMLVAEAKKFESNIRVSNLDGDGQVVNAKSL 359
           E              F ++N HGLHARPG MLV   K+F S+I V+NLDG G+  N +SL
Sbjct: 289 E--------------FVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL 334

Query: 360 MKVIALGVKHNHQLQFTAEGPDAEAALQALGVAINAGLGEG 400
           MKV+ALGVK  H+L+FTA+G DAE AL+A+G AI AGLGEG
Sbjct: 335 MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEG 375