Pairwise Alignments

Query, 580 a.a., PTS fructose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., PTS fructose transporter subunit IIBC from Serratia liquefaciens MT49

 Score =  664 bits (1712), Expect = 0.0
 Identities = 349/541 (64%), Positives = 419/541 (77%), Gaps = 6/541 (1%)

Query: 42  STVIAGHTLSEEEINKADLVILAANGKIDMQRFVGKKVYQSPITACTSDPVGYLKQAAEQ 101
           + V  G TL E   + A+LV++A           GK+VY   +     +P  +L QA  +
Sbjct: 26  AAVKTGLTLVESAAD-AELVVVAGQTVPADAALNGKRVYVGDVAHAVREPEAFLAQAMAE 84

Query: 102 ATELSSEQATRCDSPATASVSAKKIVAITACPTGVAHTFMAAEALEAEATRQGHQIKVET 161
           A    + QA        A+   K+IVAITACPTGVAHTFMAAEA+E+EA ++G  +KVET
Sbjct: 85  A---KAYQAPAAAVVEPAAAGQKRIVAITACPTGVAHTFMAAEAIESEAKKRGWWVKVET 141

Query: 162 RGSVGAKNQLTEQEIAAADLVIIAADIDVPLDRFNGKKLYKTSTGLTLKKTAQELSNAFA 221
           RGSVGA N +T +E+AAADLVI+AADI+V LD+F GK +Y+TSTGL LKKTAQEL  A A
Sbjct: 142 RGSVGAGNAITPEEVAAADLVIVAADIEVDLDKFAGKPMYRTSTGLALKKTAQELDKAQA 201

Query: 222 QAKTFS--SSANSATNEKAEEKKGVYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKE 279
           +A+ F    S   AT  K +E  G Y+HL+TGVS+MLP+VVAGGL IALSFVFGI+AF+ 
Sbjct: 202 EAEIFQPQKSGAPATAGKKKESAGPYRHLLTGVSYMLPMVVAGGLCIALSFVFGIKAFEV 261

Query: 280 EGTLAAALMQIGGGSAFALMIPVLAGYIAFSIADRPGLAPGLIGGMLASSTGAGFLGGIV 339
           +GTLAAALMQIGGGSAFALM+PVLAG+IAFSIADRPGL PGLIGGMLA STGAGFLGGI+
Sbjct: 262 KGTLAAALMQIGGGSAFALMVPVLAGFIAFSIADRPGLTPGLIGGMLAVSTGAGFLGGII 321

Query: 340 AGFLAGYSAKFIADKVQLPQSMAALKPILIIPFIASLFTGLVMIYVVGGPMSSIMSGMTS 399
           AGFLAGY AKFI+ K++LPQSM ALKPILIIP +ASL  GL+MI++VG P++ IM G+T 
Sbjct: 322 AGFLAGYVAKFISTKLRLPQSMEALKPILIIPLVASLIVGLIMIFIVGTPVAKIMEGLTH 381

Query: 400 FLNNMGSTNAILLGIVLGAMMCFDLGGPVNKAAYTFGVGLLASQTYAPMAAIMAAGMVPA 459
           +L ++G+ NA+LLG +LGAMMC D+GGPVNKAAY FGV LL+S  YAPMAAIMAAGMVP 
Sbjct: 382 WLQSLGTANAVLLGAILGAMMCTDMGGPVNKAAYAFGVALLSSSVYAPMAAIMAAGMVPP 441

Query: 460 LGMGLATFIAKDKFEAGEREAGKASFVLGLCFISEGAIPFAAKDPMRVIPACMVGGAVTG 519
           L MGLAT +A+ KFE  E+E GKA+ VLGLCFISEGAIPFAA+DPMRV+P C+ GGA+TG
Sbjct: 442 LAMGLATLLARRKFEKSEQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIAGGALTG 501

Query: 520 ALSMLFGAKLMAPHGGLFVLLIPNAISPVLLYLVAIAVGTAITGFGYAMLKKSAQAKAVA 579
           ALSM FGAKLMAPHGGLFVLLIP AI+PVLLYLVAI  GT + G  YA+LK++    A  
Sbjct: 502 ALSMAFGAKLMAPHGGLFVLLIPGAITPVLLYLVAIVAGTLLAGVSYALLKRAEVPAATV 561

Query: 580 A 580
           A
Sbjct: 562 A 562



 Score = 75.5 bits (184), Expect = 5e-18
 Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 11/139 (7%)

Query: 4   KIAIVTACPSGVANSIIAAGLLQQASKTLGWEAYIECHSTVIAGHTLSEEEINKADLVIL 63
           +I  +TACP+GVA++ +AA  ++  +K  GW   +E   +V AG+ ++ EE+  ADLVI+
Sbjct: 105 RIVAITACPTGVAHTFMAAEAIESEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIV 164

Query: 64  AANGKIDMQRFVGKKVYQSPITACTSDPVGYLKQAAEQATELSSE----QATRCDSPATA 119
           AA+ ++D+ +F GK +Y++            LK+ A++  +  +E    Q  +  +PATA
Sbjct: 165 AADIEVDLDKFAGKPMYRTSTGLA-------LKKTAQELDKAQAEAEIFQPQKSGAPATA 217

Query: 120 SVSAKKIVAITACPTGVAH 138
               +         TGV++
Sbjct: 218 GKKKESAGPYRHLLTGVSY 236