Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., Type II restriction adenine-specific methylase (EC 2.1.1.72) from Sphingobium sp. HT1-2

 Score = 49.7 bits (117), Expect = 8e-11
 Identities = 47/232 (20%), Positives = 96/232 (41%), Gaps = 31/232 (13%)

Query: 15  SKIYQMDAVDWLKTLENCSVDLFITDPPYESL---EKYRQIGTTTRLKESKSSSNQWFSV 71
           +++ + D +  +  L +  +D+   DPPY      + +R  G   R+    +  +++ ++
Sbjct: 31  NRLLRGDCIAEMAKLPDGCIDMIFADPPYNLQLGGDLFRPEGG--RVDAVDNDWDKFDTL 88

Query: 72  FPNTRFEELF-REVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDKC---A 127
               RF + +  +  R+LK     ++      +F      +  GF     I+W K     
Sbjct: 89  SSYDRFTKAWLAQARRILKPNGTIWVIGSYHNIFRVGAALQDEGFWILNDIIWRKANPMP 148

Query: 128 IGMGYHYRARYEFILFFEKGKRKLNDLS------VPDVLEYKRVW--------------- 166
              G  +   +E +++  +G+      +      + D L+ +  W               
Sbjct: 149 NFKGTRFTNAHETLIWASQGEDAKYTFNYKAMKTLNDELQMRSDWVLPICGGQERLKRNG 208

Query: 167 -KGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217
            K +PT+KP  LL  ++   +   +IV D FFG+G+T   A  L R++IG +
Sbjct: 209 TKAHPTQKPESLLYRVMLSCTKPGDIVLDPFFGTGTTGAVAKRLGRQWIGIE 260