Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., site-specific DNA-methyltransferase from Magnetospirillum magneticum AMB-1

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 35/235 (14%)

Query: 14  MSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESKSSS--NQW--F 69
           ++ I   D +  + +L   SVDL   DPPY      +  G   R   SK      +W  F
Sbjct: 5   LNTILSGDCIAMMNSLPAGSVDLIFADPPYN----LQLGGELLRPNNSKVEGVDEEWDRF 60

Query: 70  SVFP--NTRFEELFREVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDK-- 125
           S F   ++   +  +   RVLK     ++      +F    I + +GF     IVW K  
Sbjct: 61  SDFAAYDSFTRDWLKAARRVLKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSN 120

Query: 126 -------------------CAIGMGYHYRARYEFILFFEKGKRKLNDLSVPDVLEYKRVW 166
                              CA      Y   Y+ +       +  +D ++P     +R+ 
Sbjct: 121 PMPNFKGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALNDDLQMRSDWTLPLCTGGERLR 180

Query: 167 ----KGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217
               K +PT+KP  LL  +I  S+   ++V D FFG+G+T   A  L R +IGC+
Sbjct: 181 NAGRKTHPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCE 235