Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA adenine methyltransferase YhdJ from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 85.9 bits (211), Expect = 6e-22
 Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 14/217 (6%)

Query: 14  MSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESKSSSNQWFSVFP 73
           MS+  Q D V  + T    +VD  +TDPPY    + RQ  T    K     +++W     
Sbjct: 1   MSRFIQGDCVRVMATFPGNAVDFILTDPPYLVGFRDRQGRTIAGDK-----TDEWLQPAC 55

Query: 74  NTRFEELFREVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDKCAIGMGYH 133
           N        E+YRVLKK +    F     +       ++ GF     +V+ K       +
Sbjct: 56  N--------EMYRVLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKTYTSKAAY 107

Query: 134 YRARYEFILFFEKGKRKLNDLSVPDVLEYKRVW-KGYPTEKPVELLEVLIRQSSSENEIV 192
              R+E      KG+  L    +PDVL +K    + +PTEKPV  L+ LI   +  N IV
Sbjct: 108 VGYRHECAYILAKGRPALPQKPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIV 167

Query: 193 ADSFFGSGSTLIAANNLSRKYIGCDISSSAHEYFKNR 229
            D F GSGST +AA    R+YIG ++    H   + R
Sbjct: 168 LDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQR 204