Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., cell cycle regulated site-specific DNA-methyltransferase protein from Agrobacterium fabrum C58

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 54/235 (22%), Positives = 90/235 (38%), Gaps = 39/235 (16%)

Query: 17  IYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESK---SSSNQWFSVFP 73
           I + D V  L  L + SVD    DPPY       Q+G T    +     +  ++W     
Sbjct: 28  IIKGDCVAALDALPSQSVDAIFADPPYNL-----QLGGTLHRPDQSLVDAVDDEWDQFAS 82

Query: 74  NTRFEELFRE----VYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDKC--- 126
              ++   R       RVLK     ++      +F    + +++ F     IVW K    
Sbjct: 83  FDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVGAMLQNLDFWILNDIVWRKTNPM 142

Query: 127 AIGMGYHYRARYEFILFFEKGKRKLNDLSVPDVL-------EYKRVW------------- 166
               G  ++  +E +++  +  +  +     D L       + +  W             
Sbjct: 143 PNFKGRRFQNAHETMIWASRDPKAKSYTFNYDALKASNDDVQMRSDWLFPICSGHERLKG 202

Query: 167 ----KGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217
               K +PT+KP  LL  +I  S+   +IV D FFGSG+T   A  L R ++G +
Sbjct: 203 DDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSGTTGAVAKRLGRHFVGIE 257