Pairwise Alignments

Query, 279 a.a., isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., putative isomerase YddE from Alteromonas macleodii MIT1002

 Score =  108 bits (269), Expect = 2e-28
 Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 18/245 (7%)

Query: 27  IKIDIYDVFIGKSAFGNPCGVLELNGWLSDSELHQITREVGQPVTSFITHVD-GRFHIRW 85
           IKI++ D F      GNP  V+    WLSD ++ +I  E     T+F+   D G F IRW
Sbjct: 3   IKINVVDAFTNVRFKGNPAAVVITGKWLSDEKMREIAAENNLSETAFLVEDDNGVFAIRW 62

Query: 86  FALDGEINLCGHGSLGAGAAILSK-YQLENV-VFNSKYGEVVISKRDDQYSLVLPSWEAK 143
           F+   EI+ CGH +L +   I S+ YQL ++ +F    G + + K+DD +  +       
Sbjct: 63  FSPMTEIDFCGHATLASAFVIFSENYQLPHISLFAKSVGTMKVVKKDDGFIQM-----DF 117

Query: 144 PCAVPVEISDLATDAIDVFSTRDLVL---------VLPSVEAVMNFQPDDDRLREINEYH 194
           P  +P  ++D+    +   S +   +         V  + + V++   D ++L+ +  Y 
Sbjct: 118 PNRMPHPVNDVPEALLQGLSIKPKSILKNNQAYFAVYSNEDDVLSVIQDSEQLKSLAPYD 177

Query: 195 ALIVTAANGNSGYVLRYFAPKIGISEDLATGSAQCSLAPYWFKKLGSDALNARQLSMSGG 254
            ++VTA      +V RYF P  G  ED  TGS    LAPYW K  G   L A Q S  GG
Sbjct: 178 -VVVTAPGTQFDFVSRYFWPANGGDEDPVTGSIHTGLAPYWAKVFGRSKLMAYQASKRGG 236

Query: 255 YFEVE 259
             + E
Sbjct: 237 TLKCE 241