Pairwise Alignments

Query, 208 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., neutral amino-acid efflux system (NCBI) from Escherichia coli BW25113

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 50/198 (25%), Positives = 110/198 (55%), Gaps = 4/198 (2%)

Query: 9   FIVACLAINMIPGPDVIYIVSNTMKGKLVTGFKAAMGLGVGYFVHTLAASLGLSAIILSS 68
           ++V  + I ++PGP+ ++++ N++   +  G+ AA G+ +G  V    A  G++ +I ++
Sbjct: 13  YLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTT 72

Query: 69  AVAFSAVKWLGAAYLVYLGVQSLLSMWRGGSTLKVSESVESDKNVFVQGVIVSVLNPKVA 128
            + F+ V++LGA YL+YLG + L +  +G ++   S+  +    +F + +I+S+ NPK  
Sbjct: 73  PILFNIVRYLGAFYLLYLGSKILYATLKGKNSEAKSDEPQYGA-IFKRALILSLTNPKAI 131

Query: 129 LFFLSFLPQFIDTSSGSASMQLLWLGLLFSVLVTMCNILYASVGSWVFSR--PNSQRYSR 186
           LF++SF  QFID ++    +    L      LV+ C + +  +     ++     ++ ++
Sbjct: 132 LFYVSFFVQFIDVNAPHTGISFFILAATLE-LVSFCYLSFLIISGAFVTQYIRTKKKLAK 190

Query: 187 GLEGVSGVLLIGLASKVA 204
               + G++ +G A+++A
Sbjct: 191 VGNSLIGLMFVGFAARLA 208