Pairwise Alignments

Query, 208 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., RhtB family transporter from Agrobacterium fabrum C58

 Score =  133 bits (335), Expect = 2e-36
 Identities = 79/209 (37%), Positives = 124/209 (59%), Gaps = 14/209 (6%)

Query: 5   SLLLFIVACLAINMIPGPDVIYIVSNTMKGKLVTGFKAAMGLGVGYFVHTLAASLGLSAI 64
           +L LFI   L + ++PGP V+YI + +++     G  + +G+     VH +AA++GLSA+
Sbjct: 10  NLGLFISTTLVLLLVPGPAVLYIFARSVEQGRSAGLVSILGIHTATLVHVVAAAVGLSAL 69

Query: 65  ILSSAVAFSAVKWLGAAYLVYLGVQSLLSMWRGGSTLKVSES---VESDKNVFVQGVIVS 121
           + SSA+AFS VK+ GAAYL++LG++ L     G S +   E      S   +F +G IV+
Sbjct: 70  LASSALAFSVVKYAGAAYLIWLGLKKLF----GPSDIPDVEGGLPTRSRMRIFREGFIVN 125

Query: 122 VLNPKVALFFLSFLPQFIDTSSGSASMQLLWLGLLFSVLVTMCNILYASV----GSWVFS 177
           +LNPK ALFFL+FLPQF++   G  +MQ+ +LG+L++ +  + +  YA V    G+W+  
Sbjct: 126 LLNPKTALFFLAFLPQFVEVDRGHVAMQIAFLGILYTAIGILTDGTYALVAGTAGNWL-- 183

Query: 178 RPNSQRYSRGLEGVSGVLLIGLASKVAIS 206
              S  Y +    VSG + IGL    A +
Sbjct: 184 -KRSPVYLKAERWVSGFVYIGLGVTAAFA 211