Pairwise Alignments

Query, 320 a.a., integron integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., tyrosine recombinase XerC from Rhodanobacter sp000427505 FW510-R12

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 60/304 (19%)

Query: 16  RYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGKVATKTQSLA--LN 73
           R+ +  T+  Y   + + + F  ++  +     +     T++A + +     +SL   L+
Sbjct: 18  RHASPHTLAGYRRDLAKLLRFMQQQQLAAFDALDANRMRTFIAGEHRAGLAPKSLQRLLS 77

Query: 74  SLSFLYKEILKT------PLSLEIRFQRSQLERKLPVVLTRDEIRRLLEIVDPKHQLPIK 127
           S   L++++ +       PL   +  +  ++ RKLP VL  DE   L+E  D   QL ++
Sbjct: 78  SCRSLFRQLTREGRLTNDPL---LGVRGPKVRRKLPQVLDVDEATALVE-TDSGGQLAVR 133

Query: 128 ------LLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQI 181
                 L Y SGLRL E + L   D++ D G +R+  GKG K R V + +     L+   
Sbjct: 134 DRAMLELFYSSGLRLSELVGLHWLDLNLDDGEVRVL-GKGSKTRIVPVGRHAVAALRALG 192

Query: 182 ALAKRYYDRDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHH 241
           A      D  + +   G              AP                           
Sbjct: 193 AAEGMPADGPVFRGRGG--------------AP--------------------------- 211

Query: 242 MNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQI 301
           +N   +Q  + + A + GI K +  H LRH+FA+H+LE   D+R VQE LGH D+ TTQI
Sbjct: 212 INPRTVQLRMNKLALQQGIPKHIHPHLLRHTFASHMLESSGDLRAVQELLGHADIATTQI 271

Query: 302 YTHV 305
           YTH+
Sbjct: 272 YTHL 275