Pairwise Alignments

Query, 320 a.a., integron integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., site-specific integrase from Paraburkholderia sabiae LMG 24235

 Score =  124 bits (311), Expect = 3e-33
 Identities = 92/309 (29%), Positives = 143/309 (46%), Gaps = 45/309 (14%)

Query: 13  MQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGKVATKTQSLAL 72
           MQ R  A  T ++YL  ++ +   H ++ P L+G +E+  +L YL  + ++A  + S A+
Sbjct: 12  MQIRNLADNTQKSYLIQVSSFAR-HFRRSPELLGPEEIRAWLIYLREERELAPASLSPAI 70

Query: 73  NSLSFLYKEILKTPLSLEIRFQRSQLERKLPVVLTRDEIRRLLEIVDP-KHQLPIKLLYG 131
            +L FLY+  LK   S E  F   +   +LPV+L+ +EI    + +   KH+  + + Y 
Sbjct: 71  GALRFLYRVTLKRDWSDE-DFPLPRKPVRLPVILSLEEITTFFDSIPSLKHRTILMVAYA 129

Query: 132 SGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRD 191
           +GLR+ E   L+V DID     IR+ QGK  K+R V L+  L   L        R Y +D
Sbjct: 130 AGLRVSEVAHLQVTDIDSKRMVIRVNQGKNRKDRYVMLSPRLLEIL--------RTYWQD 181

Query: 192 LHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKAV 251
            H +                         +LFP            +  H +    + +  
Sbjct: 182 AHPRG------------------------WLFPG----------DIPGHPITRGAVSRIC 207

Query: 252 RRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHVLDRGAS 311
             + Q  GI+K +T H+LRH+FATHLLE G D+R +Q  +GH  + TT  Y  +      
Sbjct: 208 ALARQRCGIQKPITPHSLRHAFATHLLEAGTDVRRIQLLMGHRSLATTSRYLRIATSTVC 267

Query: 312 GVLSPLSRL 320
              SP   L
Sbjct: 268 ATASPFDLL 276