Pairwise Alignments

Query, 320 a.a., integron integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., integrase from Magnetospirillum magneticum AMB-1

 Score =  135 bits (340), Expect = 1e-36
 Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 47/311 (15%)

Query: 11  EFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGKVATKTQSL 70
           E M  R  +  T  +YLH ++++  F N+  P  +   +V  +  +L  QG ++  + + 
Sbjct: 13  EDMTVRNLSPATQRSYLHAVSKFSRFFNRS-PDRLDHDDVRTWQVHLVSQG-ISWASLNQ 70

Query: 71  ALNSLSFLYKEILKTPLSLEIRFQRSQLERKLPVVLTRDEIRRLLEIVDP-KHQLPIKLL 129
            + +L F Y   L+ P  +  R   ++  R+LP+VL+ DE+ R LE V   K++  +   
Sbjct: 71  FVAALRFFYGVTLRCP-EIPERIVYARQPRRLPIVLSADEVVRFLEAVPSLKNRTALTTA 129

Query: 130 YGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYD 189
           Y +GLR+ E + L++ DID     IR+ QGKG K+R V L+ +L       + + + Y+ 
Sbjct: 130 YATGLRVSEVVALKLADIDSGRMVIRVEQGKGRKDRYVMLSAQL-------LGILRTYW- 181

Query: 190 RDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQK 249
                        P A  E           H+LFP  +              +  TVL  
Sbjct: 182 -------------PLARPE-----------HWLFPGRE-----------DKPIEPTVLNS 206

Query: 250 AVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHVLDRG 309
           A R +   AGI+K VT HTLRHSFATHLLE G DIR +Q  LGH ++ TT  YT V +  
Sbjct: 207 ACRSACVAAGIDKRVTVHTLRHSFATHLLEAGTDIRIIQVLLGHNNLSTTARYTQVSNAM 266

Query: 310 ASGVLSPLSRL 320
            +   SPL  L
Sbjct: 267 IAKTTSPLDGL 277