Pairwise Alignments

Query, 176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1385 a.a., Rhs-related protein from Pseudomonas putida KT2440

 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 18  PPTKITSGSPNVKFDFMPAARLGDPLEPHSKPKHPPHGRSISSGSSTVMINGKPAAITGG 77
           P   IT+ SPNV  +   AAR+   +    K   P     I+ GS+ V IN   AA  G 
Sbjct: 74  PSGTITTASPNVFINSRKAARVEKSIGACDKHPGPVQ---IAEGSTNVFINSVAAARKGD 130

Query: 78  SISCGG-VTIGSSSVNIGDS---HTPAPSSILS--KTLYDINVKVKDTNGSICPFMEVLC 131
            ++CG  ++ GS +V IG     + P    +    +T  D+ + +    G I   ++   
Sbjct: 131 KLTCGATISGGSDNVIIGGGTYRYLPVDDEVPEWLRTTVDVLMAIAGAAGGIAQLIKA-- 188

Query: 132 LFDDGSELVMKTDANGELK---GLAKGDKMKKVSVKP 165
               G++  MK      LK   G   G+   +  V+P
Sbjct: 189 ----GTQAGMKAVMPCALKFTAGFVAGEVASRYVVEP 221