Pairwise Alignments

Query, 176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., type VI secretion system PAAR protein from Dickeya dianthicola ME23

 Score =  125 bits (315), Expect = 3e-34
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 1/103 (0%)

Query: 4   AVIVGDIGTDHDGFPPTKITSGSPNVKFDFMPAARLGDPLEPHSKPKHPPHGRSISSGSS 63
           A  VGD+GTDH+GFPPT ITSGS NV  D +PAAR+ DPL+ H+KP  PPH R I++GSS
Sbjct: 5   AAKVGDMGTDHEGFPPTAITSGSANVFIDGLPAARMSDPLDVHNKPDSPPHSRHIATGSS 64

Query: 64  TVMINGKPAAITGGSISCGGVTIGSSSVNIGDSHTPAPSSILS 106
           TV +NG   AITG  +SCGG  +GS +V +GD   P  SS++S
Sbjct: 65  TVFVNGLALAITGSQVSCGGEIVGSGTVYVGDI-PPVQSSLIS 106