Pairwise Alignments

Query, 407 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., Procyclic acidic repetitive protein (PARP) from Escherichia coli ECRC99

 Score =  126 bits (316), Expect = 1e-33
 Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 44/386 (11%)

Query: 7   VTRARNKNTGEIEEASQLNRYKNVNAIPKGQYECPNMLCRYPATPWAVNTEKRSPA-FQY 65
           +T A++ +T EI   + L    +   I    +ECP   C+  ATP +   +  + + F+Y
Sbjct: 1   MTIAKDSSTDEIIHGNDLRGMDDFY-IKTTSFECPYEPCKIKATPCSFTMKHVNQSYFRY 59

Query: 66  KKHHAEGCHFETMTGSDKHSNSDAGSSSFKLPYVTDFIEPRKQSGDGTLGSGGKVSVKNT 125
              H +GC        + H+++D               E +  S    + S  K+ VK  
Sbjct: 60  GDKHKDGCGIHDPRYKNNHTSND---------------ERKHNSPPAPVISLLKIDVKPR 104

Query: 126 SGGRTKTGISRTARKNQY--------SSMLGALVDFYLEDPDKHGPLYLNLLNRPFTYRK 177
            G +    I     K++         SS +  +VD+Y+ + + +  L +       +Y+ 
Sbjct: 105 GGVKNARNIKNENHKDEKKGNEHPVSSSSIKPVVDYYINNSNHNEQLSIPPYGTR-SYKD 163

Query: 178 SFQEITSKRNIGYKDNFVFYCEIKNSVPIVINEEHFTIELMRKHQDVQN-YKVSFDTDGW 236
           +FQ I  K NI Y    ++Y   ++++ +  + +   I  + + +  Q  + +  D   W
Sbjct: 164 TFQLIFYKNNIRYYKPAIYYGVAQSNIRLHEDSDKHCITFLARDKKTQKPFTLEIDVSDW 223

Query: 237 TEHQKQSLIESLKYVRQLST---EAFKDRIQETAY--IFFIGKQDKSERHVFHCVHSQFA 291
            + QK    +  +  R+ +    +  KD+     Y  +FF G  D++++ +F   H +  
Sbjct: 224 NKSQKDVFWKEYEKQRKEADRYYKGLKDKRNAKKYLTVFFFGMPDENDKFLFKTNHFKLV 283

Query: 292 HPYFGVKPRLLSNVWGTFKLETEISVAS--------SEVENQLVDFESKTLEDF---VPE 340
           +  F  K     N    + +E ++SV+S        S+++++  ++  +T  DF   +PE
Sbjct: 284 YVAFLGKFESSYND-SNYYIENDLSVSSLNEQPISLSDIDHKNHEYNIETSLDFSSPLPE 342

Query: 341 PEPEPEPEPEPEPEPEPEPEPEPEPE 366
           PEPEPEPEPEPEPEPEPEPEPEPEPE
Sbjct: 343 PEPEPEPEPEPEPEPEPEPEPEPEPE 368