Pairwise Alignments

Query, 326 a.a., IS5 family transposase ISVch5 from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Transposase DDE domain protein from Alteromonas macleodii MIT1002

 Score =  379 bits (974), Expect = e-110
 Identities = 180/211 (85%), Positives = 195/211 (92%)

Query: 28  MEKLLPWSQLLAVIEPFYPKAGNGRRPYPLETMFRIHCMQQWYSLSDEAMEDALYEIASM 87
           M+ LLPWSQLL VIEPFYPKAGNGRRPY LETMFRIHCMQQWYSL DEAMEDALYEIASM
Sbjct: 1   MDNLLPWSQLLEVIEPFYPKAGNGRRPYALETMFRIHCMQQWYSLGDEAMEDALYEIASM 60

Query: 88  RLFAHLSLDRAIPDRTTIMNFRHLLEQHQLGRSVFEPINQWLSERGVLMKQGTLVDATII 147
           R FA LSLD+AIPDRTTIMNFRHLLE+H+L R +F+ +NQWLS+ GV+M QGTLVDATII
Sbjct: 61  RQFAQLSLDKAIPDRTTIMNFRHLLEKHKLTRQLFKTVNQWLSDCGVMMTQGTLVDATII 120

Query: 148 EAPSSTKNKTNQRDPEMHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANEHDLNQLS 207
           EAPSSTKNK N+RDP+MHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANEHDLNQ+ 
Sbjct: 121 EAPSSTKNKKNERDPDMHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANEHDLNQMK 180

Query: 208 NLLHGDEEFVSGDAGYQGAHKRDELKGADVD 238
           NLLHGDEEF+SGDAGYQGA KR+ELK  DV+
Sbjct: 181 NLLHGDEEFISGDAGYQGAEKREELKEKDVE 211