Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Integrase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 83/360 (23%), Positives = 147/360 (40%), Gaps = 29/360 (8%)

Query: 32  VRVSPKGKITWVYRANINGKMQRIKLGEY-PA--------MKLRDAIQA-RESRAELVEL 81
           V VSP G +T+ +   +NG+ + + +G Y PA         KL DA +A  + ++   E 
Sbjct: 3   VTVSPTGTVTFRFDYRLNGRRETLTIGRYGPAGISLAMAREKLLDAKKAVAQGKSPAHEK 62

Query: 82  GFDPRKSTRSANDDSIITLNDLIDYW-AENHARDNIKQCDALLK-MFHTDITPTLGNYPA 139
             + R+ T + N        D+   W A     D+ +   A+ K +   DI P   N   
Sbjct: 63  QREKRRLTAAKN------FGDMTAQWLASARMADSTR---AMRKSIVDRDILPAFQNRLL 113

Query: 140 KQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVP 199
            ++   D   +  K K R +   + ++    KQV ++A+ HG    N   ++  A +   
Sbjct: 114 NEITADDLRALCGKVKGRGAPATAVHVRDIVKQVYAFAILHGEKVDNPAADVGAASIAT- 172

Query: 200 TTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLIFANRSNELRLAKKADFDLEKRV 259
             PK        ++ + + ++ ++ + + +  LR++L+   R +EL  A   + D E   
Sbjct: 173 FVPKDRALSPLEIRLMSRQMESVATYPTIRLALRMILLTLVRKSELIEATWDEVDFETAT 232

Query: 260 WTVPEENNKVRKKQGGAIRRAIPPLAEKIIMEQFAIWPNHTMMFPPVNTEQDRPMSANVP 319
           WT+P++  K R      + R    L   + +   A      +   P   + DR MS    
Sbjct: 233 WTIPKQRMKGRNPHVVYLSR--QALDILVALHTCAAGSKFVL---PSRYDSDRCMSHATL 287

Query: 320 VDFGSKLADRIEELGFPRT--TNHDMRRTARNIWESMGVPYHVAETMLGHKVHTGVQSHY 377
                 +A R +  G P    T HD+RRT   +   +G      E  L H+     +S Y
Sbjct: 288 NRVTQIVAQRAKAAGLPLEPFTVHDLRRTGSTLLNEIGFNRDWIEKCLAHEEGRSSRSIY 347