Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., Integrase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 78/343 (22%), Positives = 135/343 (39%), Gaps = 15/343 (4%)

Query: 37  KGKITWVYRANINGKMQRIKLGEYPAMKLRDAIQ-ARESRAELVELGFDPRKSTRSANDD 95
           +G+ +W+ R  I  +     LG YP + L+DA + AR  RA L++ G D     R     
Sbjct: 20  QGQASWILRYRIATRRHEKVLGRYPDISLKDARELARRDRA-LIQQGIDVNAQKRQEKLK 78

Query: 96  SI--ITLNDLIDYWAENHARDNIKQCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLK 153
           ++    +  L   W E H    IK    + ++    I P +G     ++       V  K
Sbjct: 79  ALQMEDVKGLGQVWYERHILAKIKHPQVVERVLRRHIYPVIGKLAIDEVRPHHIDAVLGK 138

Query: 154 AKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVPTTPKRSRQDEQGVK 213
                +   + + M    ++  YA +      N +     +D G    P+      + + 
Sbjct: 139 IVDAGAPTVANDAMRYMFRMFHYAAKRKWTDANPVAGFDLSDAGGTEAPRDRFLSYEELM 198

Query: 214 ALWKAIDDI-SIHESNKNFLRLMLIFANRSNELRLAKKADFDLEKRVWTVPEENNKVRKK 272
           AL + + +  +    N+  + L+L    R  EL  A+  DFDL + VW +     K +  
Sbjct: 199 ALGRDMRETPNFGRINELAVWLLLALCVRKMELLSARVTDFDLARGVWRLLPNRTKTKSY 258

Query: 273 QGGAIRRAIPPLAEKIIMEQFAIWPNHTMMFPPVNTEQDR------PMSANVPVDFGSKL 326
               +   +    +++++  FA    H  +FP     + R          ++  D  +  
Sbjct: 259 IEIPLSLQVVEWLKEVVL--FACGNPH--LFPARRLIRKRNGVPCKNRFEHISPDTLNVA 314

Query: 327 ADRIEELGFPRTTNHDMRRTARNIWESMGVPYHVAETMLGHKV 369
             R+        T HDMRRTAR    ++GV   VAE  L HK+
Sbjct: 315 LKRLPMDDIEHFTVHDMRRTARTQLSALGVDPFVAERALNHKL 357