Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 83.6 bits (205), Expect = 9e-21
 Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 26/378 (6%)

Query: 3   MAITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRIKLGEYPA 62
           M +TD  ++A   KP     +++   G+ + V+P+ +  W  +    GK + + LG YP 
Sbjct: 1   MPLTDLQIKAA--KPADKPIKLADGGGMFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPD 58

Query: 63  MKLRDAIQARESRAELVELGFDPRKSTRSANDDSIITLNDLI-----DYWAENHARDNIK 117
           + ++ A Q R+   + +  G DP  + ++     ++   D       +++A+N A     
Sbjct: 59  VTIKTARQLRDDAKKQLANGIDPSDARKAKKSSQLLDGPDSFENVAREWFAKNVATWAET 118

Query: 118 QCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYA 177
               +L+   +D+ P +G  P   +     + V  K + R +   +   +    Q++ YA
Sbjct: 119 HSSKVLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIMRYA 178

Query: 178 VRHGLLKYNVLTELKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLI 237
           V  G  + +   +L+ A   V      +  D + V  L +A D        K  L+L  +
Sbjct: 179 VATGRAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQLAPL 238

Query: 238 FANRSNELRLAKKADFDLEKRVWTVPEENNKVRKKQGGAIRRAIP--PLAEKIIMEQFAI 295
              R  ELR AK AD DL+   W      +K RK  G  I   +P    A +I+ +    
Sbjct: 239 VFVRPGELRKAKWADIDLDAGSWAF--HASKARK--GETIEHLVPLSTQAVEILRDLHQY 294

Query: 296 WPNHTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGF---PRTTNHDMRRTARNIW- 351
             N   +FP    +  +PMS        + +   +  LG+      T H  R  AR I  
Sbjct: 295 TGNRECLFP--GRDPRKPMSE-------AAVNAALRRLGYDTKTEITGHGFRAMARTILA 345

Query: 352 ESMGVPYHVAETMLGHKV 369
           E +G   HV E  L H+V
Sbjct: 346 EQLGEDPHVIEQQLAHRV 363