Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Integrase from Enterobacter asburiae PDN3

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 92/385 (23%), Positives = 166/385 (43%), Gaps = 29/385 (7%)

Query: 3   MAITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRIKLGEYPA 62
           M + D  +R    KP +    +    GL + + P G  +W +R    GK + I LG YP 
Sbjct: 1   MPLNDMQIR--RAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPT 58

Query: 63  MKLRDAIQARESRAELVELGFDP---RKSTRSA-NDDSIITLNDLIDYWAE-NHARDNIK 117
           + L DA   RE   +LV  G +P   RK  + A   +S      +   W +    + +  
Sbjct: 59  ITLADARSRREDARKLVAEGKNPSEVRKEQKIALQTESENAFEKIATEWHQMKSTKWSAG 118

Query: 118 QCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYA 177
               +++ F  DI P +G  P  +++ ++ + V  K ++R + +    +  R  +V  YA
Sbjct: 119 YASDIMEAFQNDIFPYVGERPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYA 178

Query: 178 VRHGLLKYNVLTELKKA-DVGVPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLML 236
           +  G  ++N   +L  A +V         + DE  +    +A+D  +     +   +L++
Sbjct: 179 IATGRAEFNPAADLSSALEVHQSNHYPFLKADE--ITDFLRALDSYTGSRLVQIATKLLM 236

Query: 237 IFANRSNELRLAKKADFDLEKRVWTVPEENNKVRKKQGGAIRRAIPPLAEK---IIMEQF 293
           I   R+ ELR A  ++FDL+  +W +P E  K+R       R  + PL+ +   ++ E  
Sbjct: 237 ITGVRTIELRAALWSEFDLDNALWEIPAERMKMR-------RAHLVPLSTQALDLLNELK 289

Query: 294 AIWPNHTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGF-PRTTNHDMRRTARNIWE 352
            +  N+  +FP  N + ++PMS        + +   I+ +G+  + T H  R T   I  
Sbjct: 290 IMTGNYRYVFPGRN-DPNKPMSE-------ASINQLIKRIGYGGKLTGHGFRHTLSTILH 341

Query: 353 SMGVPYHVAETMLGHKVHTGVQSHY 377
             G      E  L H     ++  Y
Sbjct: 342 ERGYESIWIEMQLAHVDKNNIRGTY 366