Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., integrase from Escherichia coli ECRC62

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 76/368 (20%), Positives = 149/368 (40%), Gaps = 19/368 (5%)

Query: 16  KPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRIKLGEYPAMKLRDAIQARESR 75
           +P     ++S   GL + V   G   W  +  I GK +++ LG YP + L +A   R+  
Sbjct: 12  RPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDA 71

Query: 76  AELVELGFDP----RKSTRSANDDSIITLNDLIDYWAENHARD-NIKQCDALLKMFHTDI 130
            +++  G DP    RK   +    +  T + L   W ++ +   +     ++L+    DI
Sbjct: 72  RKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDI 131

Query: 131 TPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTE 190
            P LG      +  ++ + +  + ++R S +    +     Q+  YA+  G    N  +E
Sbjct: 132 FPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASE 191

Query: 191 LKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLIFANRSNELRLAKK 250
           L  + +  P            +    + + +       +    L+L+   R+ ELR A+ 
Sbjct: 192 L-TSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEW 250

Query: 251 ADFDLEKRVWTVPEENNKVRKKQGGAIRRAIPPLAEKIIMEQFAIWPNHTMMFPPVNTEQ 310
           ++ D +  +WT+PE   K+R+K    + R     A  I+++       + ++FP    + 
Sbjct: 251 SEIDFDNALWTIPESRMKMRRKHVVPLSRQ----ATDILLQLKTFSGQYRLVFPG-RCDI 305

Query: 311 DRPMSANVPVDFGSKLADRIEELGFP-RTTNHDMRRTARNIWESMGVPYHVAETMLGHKV 369
           ++PMS        + +   ++ +G+  R T H  R T   I    G      E  L H  
Sbjct: 306 NKPMSE-------ASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD 358

Query: 370 HTGVQSHY 377
              ++  Y
Sbjct: 359 KNAIRGTY 366