Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 79/358 (22%), Positives = 139/358 (38%), Gaps = 43/358 (12%)

Query: 29  GLGVRVSPKGKITWVYRAN--INGKMQRIKLGEYPAMKLRDAIQARESRAELVELGFDPR 86
           GL + V   GK  W +R      G+   I  G YPA+ L D    R+ +  L+  G DP+
Sbjct: 30  GLFLLVKTTGKKLWRFRYQKPTTGQRTMIGFGAYPALSLADVRAMRDEKLSLLAKGIDPQ 89

Query: 87  KSTRSANDDSIITLNDLI-----DYWAENHARDNIKQCDALLKMFHTDITPTLGNYPAKQ 141
           +      +++ I +  L       ++    A  +      + +    D+ P + N P +Q
Sbjct: 90  EKVAKEVEEAQIAVESLFINVARSWFTLKQATVSTDHAKDIWRSLEKDVLPAIENIPVQQ 149

Query: 142 LELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVPTT 201
           ++    +      K R + +    L+ R  +++ YAV  GL+  N  + +  A       
Sbjct: 150 IKARTLIQALEPIKARGALETVRRLVQRINEIMVYAVNTGLIDANPASGIGMAF----ER 205

Query: 202 PKRSRQD---EQGVKALWKAIDDISIHESNKNFLRLMLIFANRSNELRLAKKADFDLEKR 258
           PK+        + + AL + I   ++    +  L   L+   R  E      A+ D+EK+
Sbjct: 206 PKKQHMPTIRPEELPALMRTIAMSNLSIPTRCLLEWQLLTLIRPAEASATAWAEIDIEKK 265

Query: 259 VWTVPEENNKVRKKQGGAIRRAIPPLAEKIIMEQFAIWP---NHTMMFPPVNTEQDRPMS 315
            W++P E  K +       R  I PL+E+ +     + P   N   +FP  N +  +PM+
Sbjct: 266 TWSIPAERMKAK-------RDHIVPLSEQALELLDIMRPISGNRDYVFPSRN-DPKKPMN 317

Query: 316 ANVP------VDFGSKLADRIEELGFPRTTNHDMRRTARNIWESMGVPYHVAETMLGH 367
           +         + +G KL              H +R  A       G    V E+ L H
Sbjct: 318 SQTANAALKRIGYGGKL------------VAHGLRSIASTAMNEAGFNPDVIESALAH 363