Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dadantii 3937

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 82/383 (21%), Positives = 158/383 (41%), Gaps = 35/383 (9%)

Query: 16  KPYSGKTEISHRFGLGVRVSPKGKITW--VYRANINGKMQRIKLGEYPAMKLRDAIQARE 73
           KP     +++   GL + ++P+G   W   YR   + K  R+  G +P + L DA   R+
Sbjct: 12  KPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPTVTLADARAKRD 71

Query: 74  SRAELVELGFDPRKSTRSANDDSI--ITLNDLIDYWAENHARDNIKQCDALLKMFHTDIT 131
              +L+  G DP+   + A  ++    T   +   W  ++ R        +++     I 
Sbjct: 72  EAKKLLVQGIDPKAEQKEAQAETAGAYTFETIARQWHASNKRWGDYHRARVMRYLELYIF 131

Query: 132 PTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSA--NLMTRFKQVLSYAVRHGLLKYNVLT 189
           P +G    ++L+    +          S KH     L  R   ++ YAV++  +  N  +
Sbjct: 132 PHIGTADIRKLKTSHLLAPIKAVD--ASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPAS 189

Query: 190 ELKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIH---ESNKNFLRLMLIFANRSNELR 246
           ++     G  TT K         + L + +  ++ +   +  +  + L L+   RS+ELR
Sbjct: 190 DMS----GALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLTFVRSSELR 245

Query: 247 LAKKADFDLEKRVWTVPEENNKVR----KKQGGAIRRA-IPPLAEKII--MEQF-AIWPN 298
            A+  +FD +K  W VP +   ++      +G  ++   I PL+ + +  +EQ  AI  +
Sbjct: 246 FAQWHEFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLEQLKAISGD 305

Query: 299 HTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGFPRTT---NHDMRRTARNIWESMG 355
           +  +FP  + + ++ MS N        + + +  +G+   T    H  R  AR      G
Sbjct: 306 NKCLFPG-DHDPEKVMSENT-------VNNALRAMGYDTQTEVCGHGFRTMARGALGESG 357

Query: 356 V-PYHVAETMLGHKVHTGVQSHY 377
           +      E  L H     V++ Y
Sbjct: 358 LWSDDAIERQLSHSERNNVRAAY 380