Pairwise Alignments

Query, 954 a.a., glycine dehydrogenase (decarboxylating) from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., aminomethyl-transferring glycine dehydrogenase subunit GcvPB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  282 bits (721), Expect = 4e-80
 Identities = 172/441 (39%), Positives = 240/441 (54%), Gaps = 35/441 (7%)

Query: 480 SETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQAA 539
           SE + +R+   L  K+ ++   + PLGSCTMK N          P F  +HP  P +   
Sbjct: 71  SEPETMRHYVRLSQKNHAIDLAIYPLGSCTMKHNPRLNEKMARLPGFSDIHPLQPISTVQ 130

Query: 540 GYAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGH-RNVCLIPS 598
           G   L + L   L  +TG  A +L P +GA GE  GL+AI+  H++ G+   R   L+P+
Sbjct: 131 GALELMDTLAHWLKTLTGMPAVALSPKAGAHGELCGLMAIRAAHEASGQHEKRRKVLVPT 190

Query: 599 SAHGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYEQ 658
           SAHGTNPATAA V   VV V   E+G +D+ DLA K+    D +++IM+T P+T G++E+
Sbjct: 191 SAHGTNPATAAFVGYSVVEVAQTEDGRVDVADLASKLG---DDVAAIMVTNPNTCGLFER 247

Query: 659 QVREVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMG 718
            + E+  + H AG   Y DGAN NA VG   PG +G D  H+NLHKTF  PHGGGGPG G
Sbjct: 248 DILEISRLTHEAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTPHGGGGPGAG 307

Query: 719 PIGVKSHLAPFLPG----HIEGG---VEGSD------FAVSAADLGSASILPISWAYIAM 765
           P+ +   LAPF P     H +GG   +E  +      F    A  G   +   + +Y+  
Sbjct: 308 PVVLSEALAPFAPAPWVVHDDGGYRLIEREEDEAEQAFGRLCAFQGQMGMYTRALSYMMS 367

Query: 766 MGADGLAEATKLAILNANYVMERLRPHYPILYRGANGRVAHECIIDIRPLKEETGISEED 825
            GADGL +  + A+LNANY+  RL       +   +G   HE + D   LK  T I+  D
Sbjct: 368 HGADGLRQVAEDAVLNANYIKARLGDLMSAAF--PDGPCMHEALFDDEWLK-GTDITTLD 424

Query: 826 IAKRLMDYGFHAPTMSFP--VAGTLMVEPTESEDLAELDRFCDALIAI-----RGEIDKV 878
            AK ++D GFH  TM FP  V G +++EPTE+E  AELDRF +A+ A+      G++D+ 
Sbjct: 425 FAKAMIDEGFHPMTMYFPLVVHGAMLIEPTETESKAELDRFIEAMRALAEAAKAGDVDRF 484

Query: 879 KNGEWPLESNPLVHAPHTQAD 899
           K   +        HAP  + D
Sbjct: 485 KGAPF--------HAPLKRLD 497



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 82/346 (23%), Positives = 122/346 (35%), Gaps = 53/346 (15%)

Query: 60  PAQSEADMLATMKSFAKLNQLKRTFIGQGYYN----TFTPNVILRNVMENPGWYTAYTPY 115
           P  SE +   TM+ + +L+Q K   I    Y     T   N  L   M     ++   P 
Sbjct: 68  PGLSEPE---TMRHYVRLSQ-KNHAIDLAIYPLGSCTMKHNPRLNEKMARLPGFSDIHPL 123

Query: 116 QP-EISQGRLESLLNYQQMVMDLTAMEI--------ANASLLDEATAAAEAMALCQRAGK 166
           QP    QG LE +      +  LT M          A+  L       A   A  Q   +
Sbjct: 124 QPISTVQGALELMDTLAHWLKTLTGMPAVALSPKAGAHGELCGLMAIRAAHEASGQHEKR 183

Query: 167 SKSNLFFVADDVHPQTIEVVKTRAAFLGFEV---------KVDSIDNITQ--QEAFGALL 215
            K  +   A   +P T       AAF+G+ V         +VD  D  ++   +    ++
Sbjct: 184 RKVLVPTSAHGTNPAT-------AAFVGYSVVEVAQTEDGRVDVADLASKLGDDVAAIMV 236

Query: 216 QYPGTTGEV-RDLTDIIAKA-QANKTLVTVATDLLASVLLKPAGEMGADVV-IGSAQRFG 272
             P T G   RD+ +I     +A         +  A V     G++G D + I   + F 
Sbjct: 237 TNPNTCGLFERDILEISRLTHEAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFS 296

Query: 273 VPMGYGGPHAAFMATRDAHKRTMPGRVIGVSIDAKGNQALRMAMQTREQHIRREKATSNI 332
            P G GGP A  +   +A     P   +   +   G   L        +    E+A   +
Sbjct: 297 TPHGGGGPGAGPVVLSEALAPFAPAPWV---VHDDGGYRL-----IEREEDEAEQAFGRL 348

Query: 333 CTAQALLA--NMAAFYAVYHGPQGLRTIARRAHHLTAILAAGLTKA 376
           C  Q  +     A  Y + HG  GLR +A       A+L A   KA
Sbjct: 349 CAFQGQMGMYTRALSYMMSHGADGLRQVAE-----DAVLNANYIKA 389