Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  153 bits (387), Expect = 1e-41
 Identities = 85/234 (36%), Positives = 138/234 (58%), Gaps = 4/234 (1%)

Query: 41  VLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKF 100
           +++D +TGKVL E N+    +PAS+TK+MT Y+  ++++ GN+  D ++ +S  A +++ 
Sbjct: 84  IIVDANTGKVLYEENSDALRHPASVTKIMTLYLLFEQLEAGNLRLDSKLEVSAKAASQQ- 142

Query: 101 PDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMN 160
              SK+ +  G  + + D  + ++ +S ND +V IAE++AGSE AF   M   A+ LGM+
Sbjct: 143 --PSKLGMRPGQTIEVEDAIKAIVTRSANDVAVVIAENLAGSESAFAEAMTEKARALGMS 200

Query: 161 NSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLR 220
            + + N  GL N    +T  D+++LGRAI    P+ Y  ++  +F Y G    N N LL 
Sbjct: 201 RTVYRNASGLPNVNQVTTARDLSILGRAIQDRFPKQYKYFATRTFYYRGQAIGNHNRLL- 259

Query: 221 DRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQLLS 274
            R   VDG+KTGYT+ +GY+L +S       L+ VV+G  S  +R+A    L+S
Sbjct: 260 GRIDGVDGIKTGYTNASGYNLVTSVKRDGRYLVGVVLGGSSGGARDARMTSLIS 313