Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  234 bits (596), Expect = 4e-66
 Identities = 139/387 (35%), Positives = 208/387 (53%), Gaps = 15/387 (3%)

Query: 9   RFSMACMAFVPT----LGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64
           RF  A  A V T    + F A   VP PP++AA  Y+L+D    ++L + +    + PAS
Sbjct: 3   RFLGALRALVITAAASISFIAAAQVPAPPEIAARSYLLLDVTANQILAQKDIDSPVEPAS 62

Query: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124
           LTKLMT+YV    ++   I     + +S  AW  K P  S+MFI+    V + DL +GLI
Sbjct: 63  LTKLMTAYVVFDALRTKKISLTQTLPVSQRAW--KMP-GSRMFIDPKMQVPVEDLIKGLI 119

Query: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184
           VQSGNDA+VA+AE V G+   FV +MN+ A+ LGM N+++ NP GL  P   +T  D+++
Sbjct: 120 VQSGNDATVALAEGVGGTVEHFVEMMNAQAKVLGMKNTTYKNPEGLTTPGHTTTARDLSI 179

Query: 185 LGRAIIRDLPEIYPLYSELSFTYNGI--TQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLA 242
           L   ++RD PE    Y+   + Y G   T      +L  R   VDG+KTG+T  AGY + 
Sbjct: 180 LATRLVRDFPEEAKYYAIKKYRYPGTPSTNDTNRNMLLFRDPTVDGLKTGHTDAAGYCMI 239

Query: 243 SSA------TSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQR 296
           ++A       +G  RL+S+V+G+ S   R  ES++LL++G+  Y+ V             
Sbjct: 240 ATAKRDFPNLTGGRRLLSIVLGATSETVRANESQKLLNWGYTAYDAVRLFDAGQPAATPA 299

Query: 297 LWYGDKNEVALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSIFYYIDEEK 356
           +W G  N + LG  + + + +P     K+   +     L AP  K   VGS+   +DE+ 
Sbjct: 300 VWKGKDNTLKLGRPEAIVVAVPAGSASKIKTQVSRPDPLVAPFTKFQQVGSLKVTLDEQP 359

Query: 357 VGEAKLVSQESVEQGGIFKRLMDWFKL 383
           V +  LV+ E+VEQ G+F R  D  +L
Sbjct: 360 VADVPLVALEAVEQAGVFGRAWDAVRL 386