Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Variovorax sp. SCN45

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 71/238 (29%), Positives = 114/238 (47%), Gaps = 16/238 (6%)

Query: 41  VLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKF 100
           ++ID  T +VL   N H  L  ASLTKLMT    G  +   ++  ++ + I+ +    + 
Sbjct: 147 LVIDQDTHEVLFSKNDHAVLPIASLTKLMT----GLLISEAHLPNEELITITQDDVDTEK 202

Query: 101 PDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMN 160
             SS++   VGT ++  +L    ++ S N A+ A+     G    FVS+MN+ A+ LGM 
Sbjct: 203 RSSSRL--TVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLSTFVSIMNAKAKMLGMK 260

Query: 161 NSSFANPHGLDNPALYSTPYDIALL-----GRAIIRDLPEIYPLYSELSFTYNGITQHN- 214
           ++ +  P GL +    S+  D+ALL       A +R L        E+    N + Q N 
Sbjct: 261 DTRYVEPTGLSS-RNQSSAQDLALLVNAAYSDATVRSLSTSPEYQVEVG---NRMLQFNT 316

Query: 215 RNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQL 272
            N L++     +   KTGY S AG  L   A     +LI V + S    SR A+++++
Sbjct: 317 TNRLVKSPDWEIGVQKTGYISEAGQCLVMQAKVAGRKLIMVFLDSAGKFSRIADAERV 374