Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Sphingobium sp. HT1-2

 Score =  184 bits (466), Expect = 5e-51
 Identities = 120/385 (31%), Positives = 193/385 (50%), Gaps = 12/385 (3%)

Query: 11  SMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMT 70
           ++A   FV  L    +   P     A   Y L D  +G VL +     ++ PAS+ K+MT
Sbjct: 4   TVAATLFVGLLAQPLVAAAPPYTSEAPIAY-LKDLSSGAVLYDKGGETRMPPASMAKMMT 62

Query: 71  SYVAGQEMKRGNIHADDQVRISNNAWAKKFPDS--SKMFIEVGTYVNLMDLYRGLIVQSG 128
           ++VA + +++G +  D +  +    W +       S MF+ VG  V++ +L  G++  SG
Sbjct: 63  AHVAFRLIQKGELKLDTKFTVRPETWQQWHGPKAGSTMFLSVGEQVSVENLLHGIVTLSG 122

Query: 129 NDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGL-DNPALYSTPYDIALLGR 187
           NDA V +AE +AG+E AFV+LMN  A+++G+ NS F   +G  D    Y T  D+A L  
Sbjct: 123 NDACVVLAEGIAGTEQAFVALMNEEAKRMGLKNSHFGTSNGWPDEGVTYVTAEDLAKLAE 182

Query: 188 AIIRDLPEIYP-LYSELSFTY------NGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYS 240
           A I + P++Y   Y+  SFT+      + I Q NRN +L  +    DG+KTG+T  AG+ 
Sbjct: 183 ATIVETPDLYKKFYATRSFTWGKTMGGSDIAQANRNPIL-GKIAGADGLKTGHTEEAGFG 241

Query: 241 LASSATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYG 300
              SA     RL+ VV G  S   R  ES + + +GFR ++     +K   ++   +  G
Sbjct: 242 FTGSAEQDGRRLVMVVAGLTSFNGRITESVRFMDWGFRAWKAQPLFKKGQTVETAAVQLG 301

Query: 301 DKNEVALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSIFYYIDEEKVGEA 360
             + V+L +   + +T+PR+    +   +     ++APIAKG  +  +     +      
Sbjct: 302 SASTVSLVAPQNMAVTMPRTASANVKVKVVYTGPIKAPIAKGQQIAQLIVQTPDTPPQVL 361

Query: 361 KLVSQESVEQGGIFKRLMDWFKLLF 385
            LV+ E V + GIF RL +  K  F
Sbjct: 362 PLVAGEDVAEAGIFGRLWNGLKSFF 386