Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., penicillin-binding protein dacf precursor from Agrobacterium fabrum C58

 Score =  153 bits (386), Expect = 9e-42
 Identities = 92/249 (36%), Positives = 139/249 (55%), Gaps = 4/249 (1%)

Query: 28  VVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADD 87
           VV   P   AN  +++D  TGKV+    A +K  PASLTKLMT+Y+A  +MK G I    
Sbjct: 42  VVAVAPVANANPKMVVDVKTGKVISHQEAFRKWYPASLTKLMTAYIAFSQMKAGKISPQT 101

Query: 88  QVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFV 147
           +V +S  A  +    +SKM+ + G  + +    + L+++S ND +VAIAE + G+   FV
Sbjct: 102 EVVMSKKAADQP---ASKMYFKPGQKLTMDSALKLLLIKSANDIAVAIAETIGGTSDNFV 158

Query: 148 SLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTY 207
           + MN+ AQ+LGM+++ + NP+GL     Y+T  D+ALL   I R+ PE Y  Y  L    
Sbjct: 159 AQMNAQAQRLGMSSTHYVNPNGLPGKGQYTTARDLALLALIIKREFPE-YAHYFSLEGVT 217

Query: 208 NGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREA 267
            G   +    +L  R    DGMKTG+   +G++  +SA      +I+VV+G+ S+  R  
Sbjct: 218 TGKKNYANFNMLVGRFEGADGMKTGFICASGFNQVASAVRNGRSVITVVLGADSLAGRTD 277

Query: 268 ESKQLLSYG 276
           +S  LL  G
Sbjct: 278 QSADLLQMG 286