Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

 Score =  157 bits (397), Expect = 5e-43
 Identities = 88/251 (35%), Positives = 143/251 (56%), Gaps = 4/251 (1%)

Query: 23  FSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGN 82
           F A+  +   P  A   + ++D +TGKVL   NA    +PASLTK+MT Y+  + +  G 
Sbjct: 20  FCAILSLQASPAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGR 79

Query: 83  IHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGS 142
           +  D ++ +S N  A   P  SK+++  G    + +   G+IV+S ND +  + +H+ GS
Sbjct: 80  LRWDQKITMSKNG-ASVIP--SKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGS 136

Query: 143 EGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSE 202
           E  F  +M   A+QLGM+ + F N  GL + +  +T  D+A LG A+ RD P+ Y L++ 
Sbjct: 137 EARFAEMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAM 196

Query: 203 LSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSV 262
            SF++ G      N L+  R   +DG+KTGYT+ +G++L S+      R++ VV+G K+ 
Sbjct: 197 ESFSFRGKRIRGHNNLMY-RYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGKTA 255

Query: 263 KSREAESKQLL 273
           +SR+A+   LL
Sbjct: 256 RSRDAQMAALL 266