Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

 Score =  162 bits (410), Expect = 2e-44
 Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 3/349 (0%)

Query: 42  LIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFP 101
           +ID  TG VL+  N  Q   PASL KLMT  V    + +G +  +    +S  AW     
Sbjct: 42  MIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPETAYPVSEYAWRTGGA 101

Query: 102 DS--SKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGM 159
            S  S MF  + + V + DL  G+IVQ+ ND  + +AE +AGS+ AF   M + A +LGM
Sbjct: 102 PSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAAFAKRMTARAGELGM 161

Query: 160 NNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLL 219
           N S F+N  GL +P   +T  D+  L + +    P+ Y L+++  F +N I Q N+N LL
Sbjct: 162 NRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDRYALFTKPDFEWNRIFQRNKNTLL 221

Query: 220 RDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRF 279
              S  +DG+  G+  G+G++   SA     R+   + G    K+R+ E+++++ +G   
Sbjct: 222 MPGS-GIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTA 280

Query: 280 YETVTPHQKDTVIQNQRLWYGDKNEVALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPI 339
           +E      KD  +    ++ GD + + L   + V + +P ++  +++  I     L AP+
Sbjct: 281 FEKRHLFSKDEAVGAVSVYGGDVSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWPLNAPL 340

Query: 340 AKGDVVGSIFYYIDEEKVGEAKLVSQESVEQGGIFKRLMDWFKLLFSGW 388
             G   G++  +  E  + E  L ++ +V +G + +      K L   W
Sbjct: 341 DVGANAGTLKIFSGERLLREVPLYTKTAVGKGSLTQNATGALKELLLFW 389