Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  248 bits (633), Expect = 7e-70
 Identities = 160/505 (31%), Positives = 269/505 (53%), Gaps = 34/505 (6%)

Query: 163 SAVSPILHQGQFVGALLGDFQLD---DIITQVSNMRF--AGGAATLTDKNAVFFASDDPN 217
           S + PI+  G F G +  D  ++   D++T      +  AG  A ++    +   + D +
Sbjct: 217 SFIEPIMIDGAFQGIVGADLSVNFIQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDAS 276

Query: 218 DIGRTPSQVSPS-----FREMEAGFHR----QESGHLSFPYLGIEFDGYYKRVNLTDDMY 268
            +G   S +  S       +++AG  R    +E GH+   +L               D  
Sbjct: 277 KLGEKASDLLDSNELTNLNQLKAGEVRYDIDKEHGHIEL-FLPFTIG--------QADAR 327

Query: 269 WTLMVFVDKATALADVD-----------VAVANAITTGIVLIGISVGVIIFIINQIYKPL 317
           WTLM+ +  +  +AD               +      G+++ GI + VI  + + I +PL
Sbjct: 328 WTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPL 387

Query: 318 LRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSS 377
            ++   + D+AQG GDLTRRL  +  D+L  I+ GFN F   LQ M+ Q+  + Q +S S
Sbjct: 388 KQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDS 447

Query: 378 IEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQS 437
            E  +  A    Q +     E DQV TA+ +M+ +A+ VA + TQ+ Q    A + A Q 
Sbjct: 448 SEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQG 507

Query: 438 LVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEA 497
           + IV +  +++ +L  ++      +  + +D+  I+ +L+ I  I+EQTNLLALNAAIEA
Sbjct: 508 MRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEA 567

Query: 498 ARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTA 557
           ARAGEQGRGFAVVADEVR LA +TQ +T EI  M+ +L +GT  VV  ME ++ +   + 
Sbjct: 568 ARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESV 627

Query: 558 DKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGR 617
              ++ + +L  ++ +VS I+D++TQIA+A E+QS VA +++RN+++I ++   +     
Sbjct: 628 QHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGAD 687

Query: 618 QTVGATESLSHSNHELEQLVGKFKL 642
           ++  A+  L+    +  +L+ +FK+
Sbjct: 688 ESSAASADLTKLAEQQRRLINQFKV 712