Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  228 bits (581), Expect = 7e-64
 Identities = 153/525 (29%), Positives = 270/525 (51%), Gaps = 19/525 (3%)

Query: 136 WYQQAKSRRSPFLTEIYQDQVTGKKVI--SAVSPILHQGQFVGALLGDFQLDDI--ITQV 191
           W+   ++   P + E Y  ++ G+ V+  S V P++  G+ + +L  D  L+ +  ++Q 
Sbjct: 192 WFTCPRTLLKPCVIEPYFYRINGQNVLMTSIVFPLMANGKVIASLSVDINLNSLQAVSQQ 251

Query: 192 SNMRFAGG---AATLTDKNAVFFASDDPNDIGRTPSQVSPSFREMEAGFHRQESGHLSFP 248
           ++ +   G    + L+    +   S D + + +   QV  +      G     S H+   
Sbjct: 252 ASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLDQVDTANGAQLIGA-LASSTHIRSL 310

Query: 249 YLGIEFDGYYKRVNLTDDMYWTLM------VFVDKATALA---DVDVAVANAITTGIVLI 299
               +         + +   W ++      V V  A AL    D +      +  G+ L+
Sbjct: 311 RTDHQLKVLAPFAPIPEGKPWGVLLDVPEKVLVGPAEALKAQMDAENTRGTLLELGLGLL 370

Query: 300 GISVGVII--FIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFS 357
              VG+I+   +   + +P+L +   + D+A G GDLTRRL  +  D+L Q++  FNRF 
Sbjct: 371 AAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFL 430

Query: 358 GNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVA 417
             LQ ++ ++  + Q    + +Q +  A +    +     + DQV TA  +MS +A+ VA
Sbjct: 431 DKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVA 490

Query: 418 ESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLS 477
            S  Q+ Q    A +  +  L ++ +    + +L +D+      +  +  ++ KI  VL 
Sbjct: 491 RSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKIGSVLE 550

Query: 478 VIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLE 537
           VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S  E   ++  L  
Sbjct: 551 VIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVIEHLQN 610

Query: 538 GTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAE 597
           GT++VVG+M  + +Q Q + ++  +   +L  +  +V+ I D++ QIA+A E+QS VA E
Sbjct: 611 GTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEE 670

Query: 598 LSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           ++ N+ +IR++ ESL     ++   +++L+   ++ + L+ +F++
Sbjct: 671 INNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715